species:   Fugra
pid:       PID1015
parent:    FgmilR-7dps-16
paralog:   
locus:     NC_026474.1:9026949-9027044
matures:   ['UGUAGCUCGUGUUCUUAUAUCCU', 'GGACCCGAAGAUCGCUGGCACACC']
srr:       SRR6516244
genome:    /Users/jax/+Genomes/Fungal_genomes/Fugra.GCF_000240135.3_ASM24013v3_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516244.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516244.cram NC_026474.1:9026949-9027044

1 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

     **************************                                   *************************     
GAUGCAUGGACCCGAAGAUCGCUGGCACACCCUAUUGUAAGAGCUGGCUUCUUAUGCACUGGUACAGGUGUAGCUCGUGUUCUUAUAUCCUGUGUU
((((((.(((....((((.(((.(((((((((((.((((.(((.......))).)))).)))....))))).))).))).))))...)))))))))
--------------------------------------------------------------------UGUAGCUCGUGUUCUUAUAUCCU----- l=23 a=0 c
-------GGACCCGAAGAUCGCUGGCACACC----------------------------------------------------------------- l=24 a=0 c*
--------------------------------------------------------------------UGUAGCUCGUGUUCUUAUAUCCU----- l=23 a=0 ma
-------GGACCCGAAGAUCGCUGGCACACC----------------------------------------------------------------- l=24 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-000110001100
fn-001
